Cyrille Favreau

Scientific visualization architect | Science communicator | Monofin/Marathon swimmer

Saturday, April 11, 2020

EPFL: Coronavirus builder - Work in progress

Explore it in VR from there:

https://favreau.github.io/vrview/?image=examples/gallery/coronavirus-v1.jpg

https://favreau.github.io/vrview/?image=examples/gallery/coronavirus-v2.jpg

Data is fake for now, but working on it...



PS: Use Chrome, Firefox does not seem to like my webpage.
on April 11, 2020
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Cyrille Favreau
I am a dedicated professional advancing science and technology, specializing in the design and implementation of high-performance systems for scientific visualization. Recognized as an excellent communicator, I simplify complex concepts. As an advocate for the fusion of art and science, I contribute to innovative projects, producing high-quality media that showcases the synergy between technology, creative expression, and science.
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  • Nuon Model Visualizer
  • Blue Brain BioExplorer
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  • Quantum of Sol-R
  • Interactive Molecule Visualizer

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References

  • A glucose-COVID-19 hypothesis
  • A Machine-Generated View of the Role of Blood Glucose Levels in the Severity of COVID-19
  • A simplified morphological classification scheme for pyramidal cells in six layers of primary somatosensory cortex of juvenile rats
  • Age and sex do not affect the volume, cell numbers, or cell size of the suprachiasmatic nucleus of the rat: An unbiased stereological
  • Barcelona Centre of Contemporary Culture at the Fundación Telefónica Madrid
  • Blue Brain Neuro-Glia-Vasculature Portal. Anatomy. Reconstruction Data
  • Blue Brain Neuro-Glia-Vasculature Portal. Vasculature. Reconstruction Data
  • Brain microvasculature has a common topology with local differences in geometry that match metabolic load
  • Brayns is a large-scale scientific visualization platform. It is based on Intel OSPRAY to perform CPU Ray-tracing, which allows it to take full advantage of the underlying hardware where it runs
  • Community-based Reconstruction and Simulation of a Full-scale Model of Region CA1 of Rat Hippocampus
  • Computational synthesis of cortical dendritic morphologies
  • Cortical cell assemblies and their underlying connectivity: an in silico study
  • Digital reconstruction of the neuro-glia-vascular architecture
  • Framework for efficient synthesis of spatially embedded morphologies
  • Machine Learning and understanding the role of blood glucose levels in the severity of COVID-19
  • Model of Rat Non-barrel Somatosensory Cortex Anatomy
  • Modeling and Simulation of Neocortical Micro- and Mesocircuitry. Part II: Physiology and Experimentation
  • Modeling and Simulation of Neocortical Micro- and Mesocircuitry. Part II: Physiology and Experimentation
  • Molecular simulations and visualization: Introduction and overview by Jonathan D. Hirst, David R. Glowacki and Marc Baaden
  • Neuromodulation of neocortical microcircuitry: a multi-scale framework to model the effects of cholinergic release
  • NVIDIA GPU applications
  • Principles of Network Plasticity in Neocortical Microcircuits
  • Sol-R is a CUDA/OpenCL-based realtime ray-tracer compatible with Oculus Rift DK1, Kinect, Razor Hydra and Leap Motion devices
  • Thalamic control of sensory enhancement and sleep spindle properties in a biophysical model of thalamoreticular microcircuitry
  • Thalamic control of sensory processing and spindles in a biophysical somatosensory thalamoreticular circuit model of wakefulness and sleep
  • The Blue Brain BioExplorer (BBBE) is a tool for scientists to extract and analyze scientific data from visualization and interactive exploration
  • The cholinergic innervation develops early and rapidly in the rat cerebral cortex: a quantitative immunocytochemical study
  • The Favreau Brothers
  • The SONATA data format for efficient description of large-scale network models
  • Using Intel’s Xeon Phi for Brain Research Visualization
  • Community-based reconstruction and simulation of a full-scale model of the rat hippocampus CA1 region
  • An extended and improved CCFv3 annotation and Nissl atlas of the entire mouse brain
  • Modeling of blood flow dynamics in the rat somatosensory cortex
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